Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1289 domain-containing protein | K8M09_09330 | Not Available | + | 1850892 - 1851113 | 8408.22 |
| tigr02281 family clan aa aspartic protease | K8M09_09335 | P29938 | + | 1851110 - 1851808 | 24882.5 |
| abc transporter permease | K8M09_09340 | P0AFN8 | - | 1851813 - 1852574 | 27970.1 |
| abc transporter atp-binding protein | K8M09_09345 | P36879 | - | 1852571 - 1853497 | 33529.9 |
| sulfite exporter taue/safe family protein | K8M09_09350 | P44070 | - | 1853591 - 1854412 | 28208.5 |
| extensin family protein | K8M09_09355 | Not Available | - | 1854767 - 1855987 | 42904.5 |
| methyl-accepting chemotaxis protein | K8M09_09360 | Q2W4T8 | - | 1856243 - 1858060 | 65357.2 |
| acyl-coa thioesterase | K8M09_09365 | P0A1A2 | + | 1858256 - 1858642 | 13635.5 |
| dmt family protein | K8M09_09370 | Not Available | - | 1858648 - 1859001 | 12992.2 |
| eal domain-containing protein | K8M09_09375 | Q9I310 | + | 1859181 - 1861178 | 70215.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.