Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | K8M09_09280 | Q5QZ53 | + | 1842727 - 1843542 | 29563.8 |
| nad(p)-dependent oxidoreductase | K8M09_09285 | O33730 | + | 1843610 - 1844482 | 30499.7 |
| hypothetical protein | K8M09_09290 | Not Available | + | 1844484 - 1844852 | 12760.6 |
| lrp/asnc family transcriptional regulator | K8M09_09295 | P0ACJ7 | - | 1844860 - 1845348 | 18838.9 |
| uracil-dna glycosylase family protein | K8M09_09300 | O86222 | - | 1845466 - 1846104 | 23667.3 |
| thermonuclease family protein | K8M09_09305 | Q52928 | - | 1846116 - 1846682 | 20372.3 |
| hamp domain-containing histidine kinase | K8M09_09310 | P37894 | + | 1846854 - 1848389 | 55211.3 |
| diacylglycerol kinase | K8M09_09315 | P29945 | - | 1848399 - 1848776 | 13383.5 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | K8M09_09320 | Q92P98 | - | 1848868 - 1849884 | 34732.0 |
| adenosylcobinamide-gdp ribazoletransferase | K8M09_09325 | A6U9W5 | + | 1850073 - 1850855 | 26476.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.