Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m15 family metallopeptidase | K8M09_09180 | Not Available | - | 1824682 - 1825452 | 27662.9 |
| hypothetical protein | K8M09_09185 | Not Available | - | 1825466 - 1825852 | 14375.8 |
| pyridoxamine 5'-phosphate oxidase family protein | K8M09_09190 | Not Available | - | 1825927 - 1826535 | 22586.2 |
| alpha/beta hydrolase | K8M09_09195 | Not Available | - | 1826608 - 1827516 | 32062.7 |
| marr family winged helix-turn-helix transcriptional regulator | K8M09_09200 | A0RCV1 | + | 1827565 - 1828038 | 18141.2 |
| low temperature requirement protein a | K8M09_09205 | O33683 | - | 1828180 - 1829391 | 43925.0 |
| tmem175 family protein | K8M09_09210 | A0A086F3E3 | - | 1829407 - 1829973 | 20928.2 |
| monovalent cation:proton antiporter-2 (cpa2) family protein | K8M09_09215 | P44933 | - | 1830045 - 1831871 | 64387.5 |
| duf971 domain-containing protein | K8M09_09220 | Not Available | - | 1831906 - 1832280 | 13901.4 |
| gtp 3',8-cyclase moaa | K8M09_09225 | Q92PB4 | + | 1832481 - 1833467 | 36721.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.