Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc ligand binding domain-containing protein | K8M09_08630 | Q9V0Y9 | - | 1699863 - 1700099 | 8721.45 |
| hypothetical protein | K8M09_08635 | Not Available | + | 1700312 - 1700590 | 9748.56 |
| glycine cleavage system aminomethyltransferase gcvt | K8M09_08640 | Q54DD3 | + | 1700989 - 1702128 | 40288.1 |
| glycine cleavage system protein gcvh | K8M09_08645 | Q2K814 | + | 1702168 - 1702530 | 12698.8 |
| aminomethyl-transferring glycine dehydrogenase | K8M09_08650 | Q92Q11 | + | 1702530 - 1705400 | 104537.0 |
| response regulator | K8M09_08655 | G7WMP8 | - | 1705473 - 1705880 | 14774.6 |
| pas domain s-box protein | K8M09_08660 | Q55168 | - | 1705864 - 1707729 | 68627.9 |
| fe-s cluster assembly scaffold sufa | K8M09_08665 | Q9ZD62 | - | 1707812 - 1708201 | 13412.1 |
| suf system fe-s cluster assembly protein | K8M09_08670 | P70949 | - | 1708281 - 1708661 | 13751.3 |
| cysteine desulfurase | K8M09_08675 | Q8KUU5 | - | 1708672 - 1709910 | 45347.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.