Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleotide exchange factor grpe | K8M09_00040 | A6U5E2 | + | 6591 - 7202 | 21821.6 |
| pts iia-like nitrogen regulatory protein ptsn | K8M09_00045 | P30335 | - | 7349 - 7813 | 16340.0 |
| ribosome-associated translation inhibitor raia | K8M09_00050 | P17265 | - | 7887 - 8462 | 21068.6 |
| rna polymerase factor sigma-54 | K8M09_00055 | P22881 | - | 8714 - 10261 | 56537.9 |
| lps export abc transporter atp-binding protein | K8M09_00060 | P25885 | - | 10391 - 11176 | 28862.8 |
| hypothetical protein | K8M09_00065 | P25893 | - | 11212 - 11775 | 19639.4 |
| lps export abc transporter periplasmic protein lptc | K8M09_00070 | Not Available | - | 11783 - 12451 | 23805.8 |
| signal peptide peptidase sppa | K8M09_00075 | O34525 | + | 12654 - 13601 | 34411.8 |
| integration host factor subunit beta | K8M09_00080 | B3PZE1 | + | 13611 - 13928 | 11794.8 |
| lipopolysaccharide assembly protein lapa domain-containing protein | K8M09_00085 | Not Available | + | 13958 - 14302 | 12583.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.