Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rhomboid family intramembrane serine protease | K8M09_08480 | A8GKU2 | - | 1675924 - 1676667 | 27255.4 |
| pas domain-containing protein | K8M09_08485 | Not Available | + | 1676961 - 1677596 | 22831.8 |
| pilz domain-containing protein | K8M09_08490 | Not Available | + | 1677722 - 1678318 | 21971.3 |
| transglutaminase-like cysteine peptidase | K8M09_08495 | Not Available | + | 1678787 - 1679386 | 22039.2 |
| hypothetical protein | K8M09_08500 | Not Available | + | 1679606 - 1680367 | 28160.4 |
| d-alanyl-d-alanine carboxypeptidase | K8M09_08505 | P0AEB4 | + | 1680516 - 1681943 | 50214.8 |
| hypothetical protein | K8M09_08510 | Not Available | + | 1682104 - 1682376 | 10060.3 |
| duf1489 family protein | K8M09_08515 | Not Available | - | 1682383 - 1682820 | 16328.7 |
| l-serine ammonia-lyase | K8M09_08520 | O86564 | - | 1682894 - 1684294 | 49944.7 |
| duf599 family protein | K8M09_08525 | Not Available | + | 1684868 - 1685557 | 25653.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.