Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3126 family protein | K8M09_08330 | Not Available | - | 1645966 - 1646169 | 7884.39 |
| serine o-acetyltransferase | K8M09_08335 | P29847 | - | 1646265 - 1647098 | 30388.4 |
| alpha/beta hydrolase | K8M09_08340 | P23974 | - | 1647189 - 1647974 | 27895.4 |
| zinc-finger domain-containing protein | K8M09_08345 | Not Available | + | 1648142 - 1648390 | 8919.43 |
| fad-dependent monooxygenase | K8M09_08350 | Q9F131 | + | 1648413 - 1649570 | 40961.2 |
| cystathionine beta-lyase | K8M09_08355 | Q52811 | - | 1649641 - 1650831 | 42485.5 |
| amino acid abc transporter substrate-binding protein | K8M09_08360 | Q52812 | + | 1651184 - 1652212 | 36575.2 |
| amino acid abc transporter permease | K8M09_08365 | Q52813 | + | 1652305 - 1653513 | 43422.1 |
| amino acid abc transporter permease | K8M09_08370 | Q52814 | + | 1653515 - 1654669 | 42628.2 |
| amino acid abc transporter atp-binding protein | K8M09_08375 | Q52815 | + | 1654686 - 1655462 | 29321.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.