Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cell envelope integrity eipb family protein | K8M09_08280 | Q2YRJ0 | - | 1637364 - 1638191 | 30109.4 |
| rida family protein | K8M09_08285 | O96876 | + | 1638310 - 1638774 | 15831.3 |
| glycerophosphodiester phosphodiesterase | K8M09_08290 | O07592 | + | 1638774 - 1639499 | 26963.0 |
| gnat family n-acetyltransferase | K8M09_08295 | Not Available | + | 1639503 - 1640687 | 44337.1 |
| hit family protein | K8M09_08300 | O07513 | + | 1640705 - 1641127 | 15346.5 |
| azld domain-containing protein | K8M09_08305 | Not Available | - | 1641120 - 1641467 | 12513.4 |
| azlc family abc transporter permease | K8M09_08310 | Not Available | - | 1641464 - 1642198 | 26865.9 |
| atp-dependent clp protease atp-binding subunit clpa | K8M09_08315 | P05444 | - | 1642265 - 1644775 | 91897.1 |
| atp-dependent clp protease adapter clps | K8M09_08320 | Q92Q63 | - | 1644785 - 1645135 | 13519.3 |
| phasin family protein | K8M09_08325 | Not Available | - | 1645389 - 1645742 | 12420.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.