Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| eama family transporter | K8M09_08030 | Q56072 | + | 1590412 - 1591311 | 31529.0 |
| duf72 domain-containing protein | K8M09_08035 | O32135 | - | 1591312 - 1592124 | 30122.6 |
| glutathione s-transferase family protein | K8M09_08040 | P0ACA2 | - | 1592158 - 1592781 | 22974.8 |
| excinuclease abc subunit uvra | K8M09_08045 | P56899 | - | 1592784 - 1595702 | 107129.0 |
| single-stranded dna-binding protein | K8M09_08050 | P56898 | + | 1595991 - 1596527 | 19009.9 |
| cupin domain-containing protein | K8M09_08055 | Q53867 | + | 1596616 - 1597035 | 15201.8 |
| marc family protein | K8M09_08060 | O28169 | - | 1597025 - 1597654 | 22203.2 |
| dna gyrase subunit a | K8M09_08065 | Q0BST5 | + | 1597892 - 1600672 | 103034.0 |
| hypothetical protein | K8M09_08070 | Not Available | - | 1600791 - 1600937 | 5248.55 |
| pantetheine-phosphate adenylyltransferase | K8M09_08075 | C3MD28 | + | 1601326 - 1601820 | 17322.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.