Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf934 domain-containing protein | K8M09_07780 | Not Available | + | 1532835 - 1533326 | 17830.2 |
| ferredoxin--nadp reductase | K8M09_07785 | Q9L6V3 | + | 1533548 - 1534360 | 30276.4 |
| gntr family transcriptional regulator | K8M09_07790 | P32425 | - | 1534410 - 1535030 | 22608.2 |
| ferric reductase-like transmembrane domain-containing protein | K8M09_07795 | P23101 | + | 1535361 - 1536620 | 46594.1 |
| c-type cytochrome | K8M09_07800 | Q53143 | + | 1536668 - 1539868 | 116114.0 |
| ompa family protein | K8M09_07805 | Q05146 | + | 1539998 - 1540882 | 31540.3 |
| caspase family protein | K8M09_07810 | A1CQZ0 | + | 1540879 - 1542429 | 54808.9 |
| caspase family protein | K8M09_07815 | Q75B43 | + | 1542429 - 1543937 | 54092.4 |
| mepb family protein | K8M09_07820 | Not Available | - | 1543958 - 1544635 | 25293.4 |
| Trna-lys | Not Available | Not Available | + | 1544683 - 1544758 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.