Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | K8M09_07430 | O53467 | - | 1468450 - 1468824 | 13899.8 |
| type ii toxin-antitoxin system rele/pare family toxin | K8M09_07435 | O53468 | - | 1468828 - 1469193 | 13579.2 |
| nuclease | K8M09_07440 | Not Available | - | 1469234 - 1469653 | 14610.4 |
| tyrosine-type recombinase/integrase | K8M09_07445 | P32053 | - | 1469650 - 1470903 | 47647.3 |
| is481 family transposase | K8M09_07450 | Q8UEZ6 | - | 1471099 - 1471785 | 25428.4 |
| type i methionyl aminopeptidase | K8M09_07455 | Q9ZCD3 | - | 1471793 - 1472620 | 30063.1 |
| dna/rna nuclease sfsa | K8M09_07460 | P58429 | - | 1472652 - 1473371 | 26362.5 |
| class i poly(r)-hydroxyalkanoic acid synthase | K8M09_07465 | P50176 | - | 1473378 - 1475234 | 69130.1 |
| shoct domain-containing protein | K8M09_07470 | Not Available | + | 1475360 - 1475698 | 11844.0 |
| ll-diaminopimelate aminotransferase | K8M09_07475 | O87320 | + | 1475871 - 1477088 | 44649.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.