Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yeee/yede family protein | K8M09_07380 | Not Available | - | 1456009 - 1456332 | 10838.6 |
| is21-like element helper atpase istb | K8M09_07385 | Q45619 | - | 1456510 - 1457268 | 28471.8 |
| is21 family transposase | K8M09_07390 | Q46087 | - | 1457265 - 1458761 | 56766.2 |
| php domain-containing protein | K8M09_07395 | Q8UAY9 | - | 1458840 - 1460507 | 62311.7 |
| dna polymerase y family protein | K8M09_07400 | Q9A3J2 | - | 1460504 - 1462015 | 54499.8 |
| imua family protein | K8M09_07405 | Q9A3J1 | - | 1461930 - 1462682 | 26250.6 |
| aaa family atpase | K8M09_07410 | Not Available | - | 1462855 - 1465485 | 96272.3 |
| helix-turn-helix domain-containing protein | K8M09_07415 | Not Available | - | 1465485 - 1466252 | 28795.4 |
| hypothetical protein | K8M09_07420 | Not Available | - | 1466458 - 1467513 | 40229.6 |
| hypothetical protein | K8M09_07425 | Not Available | - | 1467595 - 1468443 | 31723.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.