Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phytoene/squalene synthase family protein | K8M09_07180 | D3ZN43 | + | 1422137 - 1422991 | 30780.0 |
| hypothetical protein | K8M09_07185 | Not Available | + | 1423107 - 1423562 | 16358.8 |
| methylenetetrahydrofolate--trna-(uracil(54)- c(5))-methyltransferase (fadh(2)-oxidizing) trmfo | K8M09_07190 | Q92Q15 | - | 1423566 - 1424975 | 50188.9 |
| duf1127 domain-containing protein | K8M09_07195 | Not Available | - | 1425130 - 1425273 | 5559.69 |
| duf1127 domain-containing protein | K8M09_07200 | Not Available | - | 1425620 - 1425763 | 5584.67 |
| duf2157 domain-containing protein | K8M09_07205 | Not Available | + | 1426706 - 1427809 | 38692.0 |
| gdyxxlxy domain-containing protein | K8M09_07210 | Not Available | + | 1427813 - 1428403 | 21316.6 |
| Trna-leu | Not Available | Not Available | + | 1428539 - 1428623 | Not Available |
| trigger factor | K8M09_07220 | C3MBV9 | + | 1428801 - 1430273 | 54054.9 |
| si-specific nad(p)(+) transhydrogenase | K8M09_07225 | P66007 | - | 1430360 - 1431766 | 51301.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.