Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | K8M09_07030 | P0DUU5 | + | 1388073 - 1389005 | 34078.1 |
| Trna-cys | Not Available | Not Available | + | 1389130 - 1389203 | Not Available |
| tonb system transport protein exbd | K8M09_07040 | Q05606 | - | 1389647 - 1390075 | 15068.3 |
| tonb-system energizer exbb | K8M09_07045 | Q05605 | - | 1390080 - 1391105 | 35256.2 |
| protein-l-isoaspartate o-methyltransferase | K8M09_07050 | Q1INS6 | + | 1391396 - 1392046 | 22995.4 |
| duf2497 domain-containing protein | K8M09_07055 | Not Available | + | 1392314 - 1393042 | 26085.6 |
| valine--trna ligase | K8M09_07060 | Q8UEN6 | + | 1393182 - 1396109 | 109555.0 |
| ompp1/fadl family transporter | K8M09_07065 | Q8ZNA5 | + | 1396467 - 1397753 | 45115.6 |
| sel1 repeat family protein | K8M09_07070 | Q52926 | + | 1398122 - 1398925 | 28955.3 |
| exodeoxyribonuclease iii | K8M09_07075 | P09030 | - | 1399089 - 1399883 | 29593.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.