Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aec family transporter | K8M09_06430 | O27435 | - | 1290831 - 1291766 | 32938.6 |
| hypothetical protein | K8M09_06435 | Not Available | + | 1291945 - 1292106 | 5549.08 |
| duf6105 family protein | K8M09_06440 | Not Available | + | 1292103 - 1292432 | 12433.3 |
| holliday junction resolvase ruvx | K8M09_06445 | B9JDM7 | - | 1292375 - 1292863 | 17660.4 |
| alkylphosphonate utilization protein | K8M09_06450 | Q02419 | - | 1292873 - 1293169 | 10708.7 |
| metal-dependent hydrolase | K8M09_06455 | A9CJ88 | + | 1293281 - 1293985 | 24912.5 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | K8M09_06460 | Q8UFS9 | + | 1294091 - 1294378 | 10389.4 |
| gnat family n-acetyltransferase | K8M09_06465 | P26945 | + | 1294382 - 1294846 | 16881.1 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | K8M09_06470 | C3MAA3 | + | 1294864 - 1296345 | 52838.9 |
| gnat family n-acetyltransferase | K8M09_06475 | Not Available | + | 1296444 - 1296953 | 18721.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.