Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| imidazolonepropionase | K8M09_06180 | Q983I1 | - | 1236437 - 1237660 | 43499.0 |
| formimidoylglutamate deiminase | K8M09_06185 | Q9HU77 | + | 1237773 - 1239116 | 47246.9 |
| histidine utilization repressor | K8M09_06190 | Q9HU78 | + | 1239159 - 1239956 | 29755.6 |
| hypothetical protein | K8M09_06195 | Not Available | + | 1240174 - 1240437 | 9877.23 |
| Trna-val | Not Available | Not Available | + | 1240545 - 1240620 | Not Available |
| Trna-asp | Not Available | Not Available | + | 1240865 - 1240941 | Not Available |
| Trna-asp | Not Available | Not Available | + | 1240989 - 1241065 | Not Available |
| nadh-quinone oxidoreductase subunit a | K8M09_06215 | O68852 | + | 1241495 - 1241860 | 13733.0 |
| nadh-quinone oxidoreductase subunit b | K8M09_06220 | B9JD43 | + | 1241851 - 1242432 | 21125.7 |
| nadh-quinone oxidoreductase subunit c | K8M09_06225 | B5ZYL4 | + | 1242451 - 1243056 | 22724.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.