Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | K8M09_05980 | Not Available | - | 1191744 - 1192973 | 45552.4 |
| duf2842 domain-containing protein | K8M09_05985 | Not Available | - | 1193119 - 1193337 | 7872.22 |
| cox15/ctaa family protein | K8M09_05990 | Q92QR8 | + | 1193544 - 1194635 | 40835.1 |
| phosphotransferase | K8M09_05995 | P13082 | - | 1194641 - 1195483 | 30510.3 |
| n-acetyl-gamma-glutamyl-phosphate reductase | K8M09_06000 | C3MA29 | - | 1195480 - 1196412 | 33504.3 |
| sulfatase-like hydrolase/transferase | K8M09_06005 | P43975 | + | 1196380 - 1198305 | 70215.8 |
| agmatinase | K8M09_06010 | Q7P0S6 | - | 1198321 - 1199274 | 34468.0 |
| 30s ribosomal protein s9 | K8M09_06015 | A6U7T6 | - | 1199413 - 1199889 | 16832.4 |
| 50s ribosomal protein l13 | K8M09_06020 | Q92QR4 | - | 1199892 - 1200356 | 17316.0 |
| paai family thioesterase | K8M09_06025 | Q97YR6 | - | 1200586 - 1201017 | 15499.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.