Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cgnr zinc finger domain-containing protein | K8M09_05440 | Not Available | - | 1099682 - 1100236 | 20500.4 |
| branched-chain amino acid abc transporter permease | K8M09_05445 | P0A2J2 | + | 1100299 - 1101195 | 31391.7 |
| molybdenum cofactor biosynthesis protein moae | K8M09_05450 | Q92QX5 | - | 1101199 - 1101672 | 16616.8 |
| molybdopterin converting factor subunit 1 | K8M09_05455 | P30748 | - | 1101676 - 1101930 | 9399.33 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | K8M09_05460 | Q1RKM3 | - | 1101932 - 1102516 | 21614.8 |
| excinuclease abc subunit uvrc | K8M09_05465 | Q2KA54 | - | 1102642 - 1104675 | 75074.4 |
| sdr family oxidoreductase | K8M09_05470 | Q08632 | - | 1104672 - 1105436 | 27401.8 |
| porin family protein | K8M09_05475 | Q52866 | + | 1105796 - 1106431 | 21964.4 |
| glutathione s-transferase | K8M09_05480 | P0ACA2 | - | 1106493 - 1107083 | 22287.9 |
| ribonuclease | K8M09_05485 | Q07465 | - | 1107098 - 1107817 | 26476.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.