Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trap transporter small permease subunit | K8M09_05390 | Not Available | + | 1089620 - 1090195 | 21006.1 |
| trap transporter large permease subunit | K8M09_05395 | Q9HU16 | + | 1090192 - 1091973 | 62167.9 |
| trap transporter substrate-binding protein | K8M09_05400 | Q3J1R2 | - | 1092119 - 1093225 | 39979.6 |
| abc-f family atp-binding cassette domain-containing protein | K8M09_05405 | A0A0H2VBH0 | - | 1093419 - 1095305 | 68517.0 |
| ggdef domain-containing protein | K8M09_05410 | A0A0H2ZJS2 | - | 1095386 - 1096465 | 38481.1 |
| hypothetical protein | K8M09_05415 | Not Available | - | 1096595 - 1096879 | 10535.7 |
| dinb family protein | K8M09_05420 | O07939 | - | 1097079 - 1097588 | 19016.6 |
| glutathione s-transferase family protein | K8M09_05425 | P27457 | + | 1097722 - 1098411 | 25272.4 |
| nucleoside-diphosphate kinase | K8M09_05430 | Q1MIY5 | + | 1098516 - 1098938 | 15355.3 |
| hypothetical protein | K8M09_05435 | Not Available | - | 1099188 - 1099685 | 17940.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.