Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alanine racemase | K8M09_05240 | Q92R07 | - | 1058336 - 1059505 | 41482.8 |
| hypothetical protein | K8M09_05245 | Not Available | + | 1059609 - 1060211 | 21410.6 |
| replicative dna helicase | K8M09_05250 | Q68WJ2 | - | 1060238 - 1061737 | 55385.7 |
| cyclopropane-fatty-acyl-phospholipid synthase family protein | K8M09_05255 | P31049 | - | 1061925 - 1063211 | 48951.4 |
| 50s ribosomal protein l9 | K8M09_05260 | C3M9A8 | - | 1063398 - 1063973 | 20761.5 |
| duf2232 domain-containing protein | K8M09_05265 | Not Available | - | 1064013 - 1064987 | 33744.0 |
| 30s ribosomal protein s18 | K8M09_05270 | B9JCB8 | - | 1065199 - 1065447 | 9310.52 |
| 30s ribosomal protein s6 | K8M09_05275 | Q8UGE7 | - | 1065472 - 1065924 | 17424.6 |
| hypothetical protein | K8M09_05280 | Not Available | + | 1066329 - 1066640 | 9825.34 |
| outer membrane beta-barrel protein | K8M09_05285 | P0A3U4 | - | 1066717 - 1067418 | 24917.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.