Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is481 family transposase | K8M09_05190 | P17493 | - | 1047771 - 1048157 | 14116.9 |
| phosphatidylserine decarboxylase | K8M09_05195 | Q9FDI9 | + | 1048533 - 1049231 | 25532.2 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | K8M09_05200 | P9WPG1 | + | 1049318 - 1050169 | 30841.0 |
| marr family transcriptional regulator | K8M09_05205 | A8GDX5 | + | 1050307 - 1050762 | 16989.7 |
| mfs transporter | K8M09_05210 | Not Available | + | 1050759 - 1052429 | 59003.5 |
| hlyd family secretion protein | K8M09_05215 | P0DPR6 | + | 1052435 - 1053472 | 36831.7 |
| sdr family nad(p)-dependent oxidoreductase | K8M09_05220 | P31808 | - | 1053680 - 1054420 | 26257.7 |
| amidophosphoribosyltransferase | K8M09_05225 | P77935 | - | 1054432 - 1055925 | 54226.8 |
| cvpa family protein | K8M09_05230 | P45108 | - | 1056126 - 1056737 | 21144.8 |
| dna repair protein rada | K8M09_05235 | Q2YMH5 | - | 1056876 - 1058279 | 49087.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.