Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | K8M09_04940 | Not Available | - | 998280 - 998756 | 16191.8 |
| gnat family n-acetyltransferase | K8M09_04945 | Q4WF30 | - | 998924 - 999457 | 20191.8 |
| nyn domain-containing protein | K8M09_04950 | Q31LZ8 | - | 999521 - 1000096 | 21858.1 |
| dna-directed rna polymerase subunit omega | K8M09_04955 | Q2KAE9 | + | 1000507 - 1000908 | 14750.0 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | K8M09_04960 | Q2YN11 | + | 1001018 - 1003246 | 83331.0 |
| duf3563 domain-containing protein | K8M09_04965 | Not Available | + | 1003417 - 1003569 | 5996.26 |
| duf2062 domain-containing protein | K8M09_04970 | Not Available | + | 1003677 - 1004267 | 21174.3 |
| holo-acp synthase | K8M09_04975 | Q8UGK4 | + | 1004264 - 1004674 | 14754.0 |
| signal peptidase i | K8M09_04980 | Q8L2J7 | + | 1004742 - 1005512 | 29044.5 |
| ribonuclease iii | K8M09_04985 | B3PUN8 | + | 1005509 - 1006228 | 26321.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.