Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | K8M09_04740 | Not Available | - | 953577 - 953753 | 6334.56 |
| uracil-dna glycosylase | K8M09_04745 | Q8ZYS2 | - | 953966 - 954826 | 31288.5 |
| hsp70 family protein | K8M09_04750 | P36928 | - | 954871 - 956163 | 46774.6 |
| sdr family oxidoreductase | K8M09_04755 | Q9KQH7 | - | 956307 - 957095 | 27216.8 |
| fad-binding oxidoreductase | K8M09_04760 | P0DV35 | - | 957120 - 958523 | 49226.6 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | K8M09_04765 | Q9HZP5 | + | 958833 - 960497 | 60514.3 |
| hypothetical protein | K8M09_04770 | Not Available | + | 960531 - 960689 | 5591.86 |
| l,d-transpeptidase | K8M09_04775 | P39176 | + | 960730 - 961359 | 23028.8 |
| abc transporter substrate-binding protein | K8M09_04780 | Not Available | + | 961704 - 962702 | 35739.3 |
| proline/glycine betaine abc transporter permease | K8M09_04785 | Q9RR45 | + | 962858 - 963745 | 32763.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.