Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pbp1a family penicillin-binding protein | K8M09_04540 | O66874 | - | 912038 - 914224 | 79729.0 |
| ycgn family cysteine cluster protein | K8M09_04545 | C3M8L8 | + | 914392 - 914877 | 18255.3 |
| mmcq/yjbr family dna-binding protein | K8M09_04550 | Not Available | - | 914885 - 915217 | 12057.6 |
| hypothetical protein | K8M09_04555 | Not Available | + | 915466 - 916005 | 19354.8 |
| hamp domain-containing histidine kinase | K8M09_04660 | Q9I0I2 | + | 932534 - 933952 | 51798.0 |
| hypothetical protein | K8M09_04665 | Q84I68 | + | 934062 - 934484 | 14359.0 |
| c-type cytochrome biogenesis protein ccmi | K8M09_04670 | P45400 | + | 934576 - 935703 | 39826.7 |
| cytochrome c maturation protein ccme | K8M09_04675 | P45402 | + | 935700 - 936149 | 15726.1 |
| heme lyase ccmf/nrfe family subunit | K8M09_04680 | P45404 | + | 936146 - 938131 | 70779.2 |
| cytochrome c-type biogenesis protein ccmh | K8M09_04685 | P45406 | + | 938128 - 938589 | 16896.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.