Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| na(+)/h(+) antiporter subunit b | K8M09_04440 | Q9RGZ4 | + | 896139 - 896558 | 14532.3 |
| na+/h+ antiporter subunit c | K8M09_04445 | O05260 | + | 896558 - 896935 | 13607.1 |
| na+/h+ antiporter subunit d | K8M09_04450 | Q9RGZ2 | + | 896953 - 898494 | 53925.7 |
| na+/h+ antiporter subunit e | K8M09_04455 | Q9RGZ1 | + | 898497 - 898970 | 17005.4 |
| is481 family transposase | K8M09_04460 | Q52965 | + | 898970 - 899245 | 9782.55 |
| monovalent cation/h(+) antiporter subunit g | K8M09_04465 | Q52966 | + | 899320 - 899676 | 12470.7 |
| mucr family transcriptional regulator | K8M09_04470 | P55323 | + | 900102 - 900536 | 15709.0 |
| transposase | K8M09_04475 | A9KPP1 | + | 900861 - 901211 | 12662.3 |
| duf6456 domain-containing protein | K8M09_04480 | Not Available | + | 901204 - 902001 | 28689.8 |
| sufe family protein | K8M09_04485 | Q52967 | - | 902031 - 902450 | 15101.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.