Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| copper chaperone pcu(a)c | K8M09_04140 | Q6ACU3 | + | 835343 - 835843 | 17336.1 |
| tigr03808 family tat-translocated repetitive protein | K8M09_04145 | Not Available | - | 835936 - 837300 | 47422.0 |
| eal domain-containing protein | K8M09_04150 | Q9I310 | + | 837541 - 839850 | 84404.3 |
| marr family winged helix-turn-helix transcriptional regulator | K8M09_04155 | O07458 | + | 839915 - 840361 | 16262.0 |
| ligase-associated dna damage response exonuclease | K8M09_04160 | B1ZZL9 | + | 840630 - 841640 | 36565.7 |
| cisplatin damage response atp-dependent dna ligase | K8M09_04165 | Q1II25 | + | 841694 - 843316 | 60611.4 |
| glutathione s-transferase family protein | K8M09_04170 | P42620 | - | 843313 - 844272 | 35248.7 |
| l,d-transpeptidase | K8M09_04175 | P39176 | + | 844528 - 845304 | 28794.4 |
| phosphoribosylglycinamide formyltransferase | K8M09_04180 | P08179 | - | 845601 - 846266 | 23116.2 |
| phosphoribosylformylglycinamidine cyclo-ligase | K8M09_04185 | B9JCV0 | - | 846263 - 847336 | 36812.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.