Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas tunicata |
| Strain | D2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas tunicata D2
Accession NumberCP031961.1
Gene Summary
Adenine Count
1197690 bp
Thymine Count
1194965 bp
Guanine Count
793178 bp
Cytosine Count
799305 bp
Genome Length
3985138 bp
Protein-coding Genes
3434 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | PTUN_a3905 | P64605 | - | 3618047 - 3618559 | 18283.1 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | PTUN_a3906 | P45030 | - | 3618574 - 3619353 | 27918.1 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | PTUN_a3907 | P63388 | - | 3619350 - 3620201 | 30845.0 |
| cation:h+ antiporter | PTUN_a3908 | Q0ZAI3 | + | 3620331 - 3621299 | 33847.1 |
| arabinose-5-phosphate isomerase | PTUN_a3909 | Q8D1Q8 | + | 3621312 - 3622283 | 34297.0 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | PTUN_a3910 | Q8Z3G5 | + | 3622283 - 3622834 | 19909.1 |
| lipopolysaccharide export system protein lptc | PTUN_a3911 | P45075 | + | 3622831 - 3623385 | 21021.1 |
| lipopolysaccharide export system protein lpta | PTUN_a3912 | P45074 | + | 3623375 - 3623875 | 18374.9 |
| lipopolysaccharide export system atp-binding protein | PTUN_a3913 | P45073 | + | 3623872 - 3624597 | 26721.8 |
| rna polymerase sigma-54 factor | PTUN_a3916 | Q9S0L2 | + | 3624659 - 3626146 | 55955.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.