Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Thioclava
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Thioclava |
| Species | Thioclava litoralis |
| Strain | FTW29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thioclava litoralis FTW29
Accession NumberCP135443.1
Gene Summary
Adenine Count
545860 bp
Thymine Count
543355 bp
Guanine Count
850907 bp
Cytosine Count
852721 bp
Genome Length
2792843 bp
Protein-coding Genes
2602 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-acp dehydratase fabz | RPE78_13135 | A4WUH0 | - | 2672028 - 2672489 | 16855.9 |
| omph family outer membrane protein | RPE78_13140 | Not Available | - | 2672623 - 2673318 | 24716.6 |
| outer membrane protein assembly factor bama | RPE78_13145 | C6V5K2 | - | 2673359 - 2675704 | 85819.4 |
| rip metalloprotease rsep | RPE78_13150 | Q92Q49 | - | 2675860 - 2677206 | 47432.1 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | RPE78_13155 | Q5LSU9 | - | 2677220 - 2678383 | 41248.5 |
| phosphatidate cytidylyltransferase | RPE78_13160 | Q2YRP9 | - | 2678387 - 2679181 | 28028.2 |
| polyprenyl diphosphate synthase | RPE78_13165 | Q89KP7 | - | 2679178 - 2679954 | 28640.2 |
| ribosome recycling factor | RPE78_13170 | Q5LSV2 | - | 2679989 - 2680552 | 20698.9 |
| ump kinase | RPE78_13175 | Q1GGR9 | - | 2680639 - 2681373 | 26525.2 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | RPE78_13180 | A3PJF5 | + | 2681518 - 2682399 | 32416.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.