Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Thioclava
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Thioclava |
| Species | Thioclava litoralis |
| Strain | FTW29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thioclava litoralis FTW29
Accession NumberCP135443.1
Gene Summary
Adenine Count
545860 bp
Thymine Count
543355 bp
Guanine Count
850907 bp
Cytosine Count
852721 bp
Genome Length
2792843 bp
Protein-coding Genes
2602 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | RPE78_12535 | Q08113 | - | 2531812 - 2532972 | 40955.1 |
| trna dihydrouridine synthase dusb | RPE78_12540 | Q08111 | + | 2533201 - 2534175 | 34451.1 |
| atp-binding protein | RPE78_12545 | P09431 | + | 2534172 - 2535239 | 38496.2 |
| response regulator | RPE78_12550 | P09432 | + | 2535245 - 2536624 | 50519.1 |
| pas domain-containing sensor histidine kinase | RPE78_12555 | P45675 | + | 2536881 - 2539067 | 80519.8 |
| sigma-54 dependent transcriptional regulator | RPE78_12560 | Q04849 | + | 2539064 - 2540467 | 52087.6 |
| trk system potassium transporter trka | RPE78_12565 | Q04856 | + | 2540541 - 2541920 | 50551.9 |
| potassium transporter trkg | RPE78_12570 | Q87TN7 | + | 2541931 - 2543454 | 54545.7 |
| rna chaperone hfq | RPE78_12575 | A3PJP5 | + | 2543594 - 2543827 | 8732.65 |
| gtpase hflx | RPE78_12580 | A0L4B2 | + | 2543913 - 2545118 | 44780.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.