Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium atrosepticum G/39, G39
Accession NumberCP036163.1
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| envelope stress response membrane protein pspc | DCX48_03840 | P0AFN4 | - | 715888 - 716253 | 13787.9 |
| envelope stress response membrane protein pspb | DCX48_03845 | P0AFN1 | - | 716253 - 716477 | 8843.77 |
| phage shock protein pspa | DCX48_03850 | P0AFM7 | - | 716579 - 717244 | 25218.9 |
| phage shock protein operon transcriptional activator | DCX48_03855 | P37344 | + | 717470 - 718459 | 36981.7 |
| 1,3-beta-glucanase | DCX48_03860 | Q59395 | - | 718528 - 720048 | 55125.8 |
| integrase | DCX48_03865 | Not Available | + | 720262 - 720324 | 2249.73 |
| sdr family oxidoreductase | DCX48_03870 | A6SSW9 | - | 720524 - 721357 | 29769.2 |
| lysr family transcriptional regulator | DCX48_03875 | Q01610 | + | 721452 - 722393 | 34438.0 |
| peptide abc transporter substrate-binding protein sapa | DCX48_03880 | Q47622 | + | 722505 - 724193 | 63728.7 |
| peptide abc transporter permease sapb | DCX48_03885 | P0A2J4 | + | 724190 - 725155 | 35364.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.