Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium atrosepticum G/39, G39
Accession NumberCP036163.1
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | DCX48_04090 | Q6D5V3 | - | 776429 - 777112 | 26345.6 |
| lysozyme inhibitor | DCX48_04095 | P28837 | - | 777219 - 777536 | 11658.1 |
| anhydro-n-acetylmuramic acid kinase | DCX48_04100 | Q6D5V5 | - | 777634 - 778746 | 39374.9 |
| glycine zipper 2tm domain-containing protein | DCX48_04105 | P0A1X1 | + | 779097 - 779564 | 15474.6 |
| transcriptional regulator slya | DCX48_04110 | Q6D5V7 | - | 779697 - 780134 | 16403.1 |
| duf1289 domain-containing protein | DCX48_04115 | P64474 | - | 780365 - 780604 | 9348.2 |
| lactoylglutathione lyase | DCX48_04120 | P0AC82 | + | 780894 - 781301 | 14788.5 |
| ribonuclease t | DCX48_04125 | Q6D5W0 | + | 781451 - 782122 | 24255.7 |
| grx4 family monothiol glutaredoxin | DCX48_04130 | P0AC71 | - | 782234 - 782584 | 13079.7 |
| peptidoglycan endopeptidase | DCX48_04135 | P76190 | + | 782926 - 783777 | 31627.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.