Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium atrosepticum G/39, G39
Accession NumberCP036163.1
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna 2-thiocytidine(32) synthetase ttca | DCX48_03790 | Q6D5P6 | + | 703929 - 704864 | 35507.7 |
| integrase | DCX48_03795 | Not Available | - | 705319 - 705525 | 7638.9 |
| zinc transporter zntb | DCX48_03800 | Q6D5P8 | - | 705593 - 706576 | 36535.3 |
| oligopeptide abc transporter substrate-binding protein oppa | DCX48_03805 | P77348 | - | 706716 - 708332 | 60267.2 |
| murein tripeptide amidase mpaa | DCX48_03810 | P0ACV7 | + | 708498 - 709217 | 25692.3 |
| thiol peroxidase | DCX48_03815 | P0A864 | + | 709297 - 709800 | 17572.9 |
| transcriptional regulator tyrr | DCX48_03820 | Q9ZIB7 | - | 709868 - 711436 | 58594.7 |
| m20/m25/m40 family metallo-hydrolase | DCX48_03825 | Q9P6I2 | - | 711573 - 713117 | 55306.1 |
| tigr01620 family protein | DCX48_03830 | Q6D5Q4 | - | 713275 - 714318 | 38739.9 |
| ycjx family protein | DCX48_03835 | P76046 | - | 714315 - 715712 | 52871.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.