Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium atrosepticum G/39, G39
Accession NumberCP036163.1
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| o-succinylbenzoate synthase | DCX48_03440 | B1A612 | - | 619836 - 620948 | 41421.0 |
| abc transporter permease | DCX48_03445 | Q9KTJ6 | - | 620990 - 621649 | 23570.7 |
| methionine abc transporter atp-binding protein | DCX48_03450 | Q6D5H7 | - | 621642 - 622664 | 37333.0 |
| phosphatase pap2 family protein | DCX48_03455 | P14924 | + | 623223 - 624530 | 47286.3 |
| hamp domain-containing protein | DCX48_03460 | Q02755 | + | 624970 - 626496 | 54595.6 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | DCX48_03465 | Q8BWU8 | - | 626531 - 627832 | 46996.3 |
| phosphotransferase | DCX48_03470 | Q5U5V2 | - | 627829 - 628953 | 41599.8 |
| sdr family oxidoreductase | DCX48_03475 | P05406 | - | 628946 - 629680 | 26300.4 |
| integrase | DCX48_03480 | Not Available | + | 629859 - 630074 | 7900.56 |
| abc transporter permease | DCX48_03485 | P45169 | - | 630119 - 630937 | 29465.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.