Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium atrosepticum G/39, G39
Accession NumberCP036163.1
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| escv/yscv/hrcv family type iii secretion system export apparatus protein | DCX48_03340 | P35654 | + | 598440 - 600542 | 77729.8 |
| escd/yscd/hrpq family type iii secretion system inner membrane ring protein | DCX48_03345 | Not Available | + | 600552 - 601487 | 34155.7 |
| escn/yscn/hrcn family type iii secretion system atpase | DCX48_03350 | Q887B5 | + | 601487 - 602854 | 49378.1 |
| type iii secretion protein | DCX48_03355 | Not Available | + | 602844 - 603281 | 17180.2 |
| type iii secretion protein | DCX48_03360 | Not Available | + | 603278 - 603799 | 19581.7 |
| yscq/hrcq family type iii secretion apparatus protein | DCX48_03365 | Q60235 | + | 603796 - 605013 | 44564.9 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | DCX48_03370 | Q46646 | + | 605010 - 605663 | 24011.5 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | DCX48_03375 | P69982 | + | 605671 - 605931 | 9259.1 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | DCX48_03380 | P69984 | + | 605938 - 606738 | 29296.4 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | DCX48_03385 | P69986 | + | 606752 - 607831 | 40456.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.