Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium atrosepticum G/39, G39
Accession NumberCP036163.1
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion protein | DCX48_03290 | Not Available | - | 588468 - 589100 | 23666.4 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | DCX48_03295 | P55714 | - | 589097 - 589864 | 28017.2 |
| type iii secretion protein | DCX48_03300 | Not Available | - | 589871 - 590242 | 13023.2 |
| hrp pili protein hrpa | DCX48_03305 | Q6RK33 | - | 590311 - 590517 | 6841.06 |
| eal domain-containing protein | DCX48_03310 | P77473 | + | 590898 - 592478 | 59266.7 |
| sigma-54-dependent fis family transcriptional regulator | DCX48_03315 | P36219 | - | 592575 - 593639 | 39632.9 |
| response regulator transcription factor | DCX48_03320 | Q7WZY4 | - | 593994 - 594635 | 23471.8 |
| pas domain s-box protein | DCX48_03325 | P54663 | - | 594672 - 596141 | 55798.2 |
| rna polymerase sigma factor | DCX48_03330 | P37929 | - | 596383 - 596925 | 20674.8 |
| yopn family type iii secretion system gatekeeper subunit | DCX48_03335 | Q05395 | + | 597253 - 598443 | 43411.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.