Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium atrosepticum G/39, G39
Accession NumberCP036163.1
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2235 domain-containing protein | DCX48_03240 | Q9KS43 | - | 577912 - 579906 | 73402.0 |
| duf4123 domain-containing protein | DCX48_03245 | Not Available | - | 579906 - 580703 | 29792.6 |
| type vi secretion system tip protein vgrg | DCX48_03250 | E0SIS4 | - | 580700 - 582727 | 74016.3 |
| type iii secretion protein hrpn | DCX48_03255 | Q47279 | - | 583193 - 584308 | 36770.8 |
| type iii secretion protein | DCX48_03260 | Not Available | - | 584454 - 584801 | 13053.8 |
| type iii secretion protein hrpt | DCX48_03265 | Not Available | - | 584794 - 584985 | 7260.67 |
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | DCX48_03270 | Q01723 | - | 585013 - 587082 | 75429.8 |
| type iii secretion protein | DCX48_03275 | Not Available | - | 587075 - 587509 | 15726.9 |
| serine kinase | DCX48_03280 | Not Available | - | 587496 - 587720 | 8066.37 |
| hrpe/yscl family type iii secretion apparatus protein | DCX48_03285 | Not Available | - | 587828 - 588430 | 22376.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.