Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium atrosepticum G/39, G39
Accession NumberCP036163.1
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | DCX48_03140 | P40332 | - | 539321 - 540328 | 37373.2 |
| porin | DCX48_03145 | Q934G3 | + | 541352 - 542170 | 31154.0 |
| porin | DCX48_03150 | P69857 | + | 542301 - 543053 | 28449.8 |
| pectate lyase | DCX48_03155 | P14005 | + | 543153 - 544859 | 63315.0 |
| extracellular solute-binding protein | DCX48_03160 | Not Available | - | 545028 - 546149 | 42236.1 |
| integrase | DCX48_03165 | Q75SP7 | - | 546715 - 547236 | 19327.3 |
| integrase | DCX48_03170 | Not Available | - | 547235 - 547486 | 9569.49 |
| hypothetical protein | DCX48_03175 | Not Available | - | 547645 - 547956 | 11762.9 |
| integrase | DCX48_03180 | E0SDG8 | - | 548643 - 561782 | 455766.0 |
| integrase | DCX48_03185 | C4SGN7 | - | 561938 - 565294 | 114280.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.