Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium atrosepticum G/39, G39
Accession NumberCP036163.1
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipoyl synthase | DCX48_20120 | Q6D7M8 | - | 4290060 - 4291025 | 36248.9 |
| lipoyl(octanoyl) transferase lipb | DCX48_20125 | Q6D7M7 | - | 4291253 - 4291927 | 24878.3 |
| duf493 family protein | DCX48_20130 | Q6D7M6 | - | 4292085 - 4292348 | 9861.01 |
| serine-type d-ala-d-ala carboxypeptidase | DCX48_20135 | P0AEB4 | - | 4292487 - 4293698 | 44116.8 |
| endolytic peptidoglycan transglycosylase rlpa | DCX48_20140 | Q8ZDG6 | - | 4293863 - 4294978 | 39037.8 |
| rod shape-determining protein roda | DCX48_20145 | P0ABG8 | - | 4294992 - 4296104 | 40529.6 |
| penicillin-binding protein 2 | DCX48_20150 | P0AD67 | - | 4296114 - 4298018 | 71486.2 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | DCX48_20155 | Q6D7M1 | - | 4298052 - 4298522 | 17665.4 |
| ribosome silencing factor | DCX48_20160 | P0AAT7 | - | 4298524 - 4298841 | 11481.7 |
| nicotinate-nucleotide adenylyltransferase | DCX48_20165 | Q6D7L9 | - | 4299035 - 4299724 | 25839.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.