Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium atrosepticum G/39, G39
Accession NumberCP036163.1
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| citrate transporter | DCX48_20070 | P42308 | - | 4282145 - 4283467 | 46654.1 |
| lysr family transcriptional regulator | DCX48_20075 | P52696 | + | 4283941 - 4284840 | 33640.5 |
| ypfn family protein | DCX48_20080 | Q6D7N6 | - | 4284904 - 4285095 | 7679.33 |
| d-alanyl-d-alanine carboxypeptidase family protein | DCX48_20085 | P43941 | - | 4285098 - 4285772 | 25566.9 |
| succinyl-diaminopimelate desuccinylase | DCX48_20090 | Q6D7N4 | - | 4285769 - 4286896 | 41122.1 |
| arsc family reductase | DCX48_20095 | P24178 | - | 4286898 - 4287275 | 14425.1 |
| aspartate/glutamate racemase family protein | DCX48_20100 | A0A0H3JGH6 | - | 4287734 - 4288444 | 25845.1 |
| cold shock-like protein cspe | DCX48_20105 | P0A974 | + | 4288662 - 4288871 | 7424.7 |
| fluoride efflux transporter crcb | DCX48_20110 | Q6D7N0 | - | 4288936 - 4289319 | 13391.7 |
| twin-arginine translocase subunit tate | DCX48_20115 | C6CQJ7 | + | 4289780 - 4289977 | 6808.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.