Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium atrosepticum G/39, G39
Accession NumberCP036163.1
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DCX48_19270 | P25539 | + | 4099661 - 4100770 | 40448.7 |
| 6,7-dimethyl-8-ribityllumazine synthase | DCX48_19275 | Q6D848 | + | 4100880 - 4101356 | 16450.9 |
| transcription antitermination factor nusb | DCX48_19280 | Q6D847 | + | 4101381 - 4101800 | 15748.0 |
| thiamine-phosphate kinase | DCX48_19285 | P0AGG1 | + | 4101869 - 4102849 | 35583.1 |
| phosphatidylglycerophosphatase a | DCX48_19290 | P18200 | + | 4102824 - 4103360 | 19958.8 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DCX48_19295 | Q6D844 | - | 4103412 - 4105277 | 67748.5 |
| (2e,6e)-farnesyl diphosphate synthase | DCX48_19300 | P22939 | - | 4105296 - 4106207 | 32563.8 |
| exodeoxyribonuclease vii small subunit | DCX48_19305 | Q6D842 | - | 4106204 - 4106452 | 9229.76 |
| trna 4-thiouridine(8) synthase thii | DCX48_19310 | Q6D841 | + | 4106706 - 4108154 | 54790.0 |
| protein deglycase yajl | DCX48_19315 | Q46948 | - | 4108190 - 4108780 | 21012.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.