Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium atrosepticum G/39, G39
Accession NumberCP036163.1
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| endopolygalacturonase | DCX48_19120 | P26509 | + | 4050079 - 4051287 | 42766.8 |
| hlyd family type i secretion periplasmic adaptor subunit | DCX48_19125 | Q03025 | - | 4051530 - 4052699 | 43623.6 |
| type i secretion system permease/atpase | DCX48_19130 | P0DKX5 | - | 4052711 - 4054849 | 78584.3 |
| type i secretion system outer membrane protein | DCX48_19135 | Q8G0Y6 | - | 4054889 - 4056328 | 53164.7 |
| ig-like domain-containing protein | DCX48_19140 | Not Available | - | 4056836 - 4066615 | 328496.0 |
| multidrug abc transporter permease/atp-binding protein | DCX48_19145 | P33941 | + | 4067325 - 4068971 | 61874.7 |
| type ii asparaginase | DCX48_19150 | P06608 | + | 4069187 - 4070227 | 36553.9 |
| shikimate kinase arol | DCX48_19155 | Q6D872 | + | 4070781 - 4071302 | 18836.6 |
| pyrimidine/purine nucleoside phosphorylase | DCX48_19160 | Q6D871 | + | 4071441 - 4071725 | 10175.2 |
| methyl-accepting chemotaxis protein | DCX48_19165 | Q9HW91 | + | 4072218 - 4074008 | 62552.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.