Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium atrosepticum G/39, G39
Accession NumberCP036163.1
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | DCX48_18770 | Q46927 | + | 3975787 - 3976605 | 29258.3 |
| cysteine desulfurase sulfur acceptor subunit csde | DCX48_18775 | P0AGF3 | - | 3976621 - 3977076 | 16696.0 |
| cysteine desulfurase csda | DCX48_18780 | Q46925 | - | 3977080 - 3978285 | 43076.5 |
| ygdi/ygdr family lipoprotein | DCX48_18785 | P65293 | + | 3978469 - 3978690 | 8032.62 |
| transcriptional regulator gcva | DCX48_18790 | P0A9F8 | + | 3979228 - 3980151 | 34604.4 |
| duf423 domain-containing protein | DCX48_18795 | P0ADR4 | + | 3980241 - 3980636 | 14491.1 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | DCX48_18800 | Q6D8F7 | + | 3980629 - 3981729 | 42112.8 |
| flap endonuclease xni | DCX48_18805 | Q6D8F6 | - | 3981787 - 3982569 | 28906.5 |
| log family protein | DCX48_18810 | P0ADS0 | - | 3982647 - 3984011 | 50352.9 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | DCX48_18815 | Q6D8F4 | - | 3984323 - 3985171 | 32465.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.