Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium atrosepticum G/39, G39
Accession NumberCP036163.1
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transketolase | DCX48_17520 | P27302 | - | 3697079 - 3699073 | 71786.9 |
| transaldolase | DCX48_17525 | Q6D8W0 | - | 3699089 - 3700039 | 35181.0 |
| ribose 5-phosphate isomerase b | DCX48_17530 | Q6D8V9 | - | 3700238 - 3700696 | 16354.4 |
| mfs transporter | DCX48_17535 | P70786 | + | 3701240 - 3702622 | 50217.1 |
| dihydroxyacetone kinase family protein | DCX48_17540 | Q6D8V6 | + | 3702624 - 3704396 | 61506.4 |
| triosephosphate isomerase | DCX48_17545 | Q6D8V5 | + | 3704393 - 3705172 | 28074.4 |
| integrase | DCX48_17550 | Q6D8V4 | + | 3705189 - 3706016 | 30688.6 |
| oxidoreductase | DCX48_17555 | Q6D8V3 | + | 3706044 - 3706901 | 30933.6 |
| sugar-binding transcriptional regulator | DCX48_17560 | Q7N2E0 | + | 3707101 - 3708063 | 35285.3 |
| nadp-dependent oxaloacetate-decarboxylating malate dehydrogenase | DCX48_17565 | Q9ZFV8 | + | 3708318 - 3710597 | 82215.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.