Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium atrosepticum G/39, G39
Accession NumberCP036163.1
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose mutarotase | DCX48_15765 | Q6DA26 | - | 3325173 - 3325487 | 12285.4 |
| rhamnulose-1-phosphate aldolase | DCX48_15770 | Q6DA25 | - | 3325631 - 3326455 | 30200.2 |
| l-rhamnose isomerase | DCX48_15775 | Q6DA24 | - | 3326460 - 3327722 | 47218.0 |
| rhamnulokinase | DCX48_15780 | Q6DA23 | - | 3327719 - 3329209 | 54726.3 |
| hth-type transcriptional activator rhas | DCX48_15785 | Q6DA22 | + | 3329526 - 3330365 | 31708.3 |
| helix-turn-helix domain-containing protein | DCX48_15790 | Q6DA21 | + | 3330390 - 3331244 | 32733.1 |
| txe/yoeb family addiction module toxin | DCX48_15795 | P69348 | - | 3331286 - 3331540 | 10174.2 |
| yoeb-yefm toxin-antitoxin system antitoxin yefm | DCX48_15800 | P69347 | - | 3331537 - 3331788 | 9398.22 |
| abc transporter atp-binding protein | DCX48_15805 | Q5PGP3 | - | 3331863 - 3333572 | 61285.8 |
| abc transporter permease | DCX48_15810 | P94312 | - | 3333569 - 3334435 | 30745.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.