Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium atrosepticum G/39, G39
Accession NumberCP036163.1
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide abc transporter permease lptf | DCX48_15665 | P0AFA0 | + | 3295505 - 3296620 | 41156.3 |
| lipopolysaccharide abc transporter permease lptg | DCX48_15670 | P0ADC7 | + | 3296620 - 3297696 | 39334.4 |
| Trna-leu | Not Available | Not Available | + | 3297914 - 3297998 | Not Available |
| cupin domain-containing protein | DCX48_15680 | P27431 | + | 3298465 - 3299586 | 42017.5 |
| alpha/beta hydrolase | DCX48_15685 | W3VKA4 | + | 3299883 - 3301013 | 40743.5 |
| abc transporter permease | DCX48_15690 | Not Available | - | 3301068 - 3302258 | 44375.8 |
| abc transporter permease | DCX48_15695 | Not Available | - | 3302252 - 3303370 | 40591.7 |
| hlyd family efflux transporter periplasmic adaptor subunit | DCX48_15700 | Q9ZJD1 | - | 3303370 - 3304368 | 36934.2 |
| tolc family protein | DCX48_15705 | J7RET5 | - | 3304365 - 3305786 | 52793.1 |
| aspartate ammonia-lyase | DCX48_15710 | P33109 | - | 3306156 - 3307595 | 52779.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.