Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium atrosepticum G/39, G39
Accession NumberCP036163.1
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleoside diphosphate kinase regulator | DCX48_15065 | P0AFW6 | - | 3166146 - 3166556 | 15088.9 |
| pts phosphocarrier protein npr | DCX48_15070 | P0A9N2 | - | 3166721 - 3166993 | 9799.73 |
| rnase adapter rapz | DCX48_15075 | Q6DAG8 | - | 3167025 - 3167882 | 32574.2 |
| pts iia-like nitrogen regulatory protein ptsn | DCX48_15080 | P17162 | - | 3168044 - 3168517 | 17202.9 |
| ribosome hibernation promoting factor | DCX48_15085 | P26983 | - | 3168614 - 3168901 | 10943.2 |
| rna polymerase factor sigma-54 | DCX48_15090 | P06223 | - | 3168925 - 3170358 | 53452.2 |
| lipopolysaccharide abc transporter atp-binding protein | DCX48_15095 | P0A9V3 | - | 3170408 - 3171133 | 26725.3 |
| lipopolysaccharide abc transporter substrate-binding protein lpta | DCX48_15100 | P0ADV3 | - | 3171137 - 3171709 | 20877.7 |
| lps export abc transporter periplasmic protein lptc | DCX48_15105 | P0ADW1 | - | 3171690 - 3172256 | 21143.9 |
| 3-deoxy-manno-octulosonate-8-phosphatase kdsc | DCX48_15110 | P0ABZ5 | - | 3172253 - 3172819 | 20567.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.