Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i secretion system permease/atpase | DCX48_07315 | Q93FH6 | + | 1491480 - 1493696 | 81129.4 |
| hlyd family type i secretion periplasmic adaptor subunit | DCX48_07320 | Q7ANN5 | + | 1493683 - 1495044 | 50667.1 |
| sensor domain-containing diguanylate cyclase | DCX48_07325 | Q8THF6 | - | 1495087 - 1496601 | 56843.5 |
| cyclic-guanylate-specific phosphodiesterase | DCX48_07330 | P37646 | - | 1497389 - 1498141 | 28571.6 |
| yfhl family 4fe-4s dicluster ferredoxin | DCX48_07335 | P52102 | + | 1498652 - 1498912 | 9825.82 |
| holo-acp synthase | DCX48_07340 | Q6D222 | - | 1498931 - 1499311 | 14184.2 |
| pyridoxine 5'-phosphate synthase | DCX48_07345 | Q3V7N3 | - | 1499311 - 1500042 | 26613.9 |
| dna repair protein reco | DCX48_07350 | Q6D221 | - | 1500123 - 1500860 | 27300.8 |
| gtpase era | DCX48_07355 | A1JKK4 | - | 1500872 - 1501777 | 34223.3 |
| ribonuclease iii | DCX48_07360 | Q6D219 | - | 1501774 - 1502454 | 25600.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.