Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium atrosepticum G/39, G39
Accession NumberCP036163.1
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | DCX48_06615 | Q6D2F2 | - | 1313805 - 1314698 | 33440.9 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | DCX48_06620 | Q6D2F1 | - | 1314695 - 1316716 | 75226.8 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | DCX48_06625 | Q6D2F0 | - | 1316713 - 1317696 | 36564.7 |
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | DCX48_06630 | Q6D2E9 | - | 1317689 - 1318837 | 42069.5 |
| nucleotide sugar dehydrogenase | DCX48_06635 | Q8FG45 | - | 1319064 - 1320230 | 43880.5 |
| ggdef domain-containing protein | DCX48_06640 | Q55434 | + | 1320751 - 1322298 | 57816.9 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | DCX48_06645 | Q6D2E6 | + | 1322406 - 1323269 | 31063.6 |
| ribosome-associated protein ybcj | DCX48_06650 | P0AAS7 | + | 1323302 - 1323514 | 7526.0 |
| cysteine--trna ligase | DCX48_06655 | Q6D2E4 | - | 1323614 - 1324999 | 52662.3 |
| doxx family protein | DCX48_06660 | P96694 | - | 1325300 - 1325722 | 15291.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.