Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium atrosepticum G/39, G39
Accession NumberCP036163.1
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein, puls/outs family | DCX48_06465 | Q01567 | - | 1282066 - 1282479 | 14655.3 |
| alanine transaminase | DCX48_06470 | P77434 | - | 1282588 - 1283829 | 46023.4 |
| l-ala-d/l-glu epimerase | DCX48_06475 | P51981 | + | 1284195 - 1285175 | 35836.0 |
| d-amino-acid transaminase | DCX48_06480 | P54694 | + | 1285218 - 1286078 | 32023.3 |
| mechanosensitive ion channel family protein | DCX48_06485 | P39285 | - | 1286159 - 1288606 | 88054.4 |
| Trna-arg | Not Available | Not Available | + | 1289004 - 1289080 | Not Available |
| duf91 domain-containing protein | DCX48_06495 | Not Available | - | 1289279 - 1290382 | 41503.7 |
| restriction endonuclease subunit s | DCX48_06500 | P19705 | - | 1290393 - 1292048 | 62094.7 |
| sam-dependent dna methyltransferase | DCX48_06505 | Q47282 | - | 1292048 - 1293520 | 55697.0 |
| dead/deah box helicase | DCX48_06510 | Q47281 | - | 1293593 - 1296019 | 92361.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.