Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium atrosepticum G/39, G39
Accession NumberCP036163.1
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspi | DCX48_06415 | P31588 | - | 1269885 - 1270250 | 13658.3 |
| type ii secretion system protein gsph | DCX48_06420 | P31587 | - | 1270247 - 1270813 | 21453.7 |
| type ii secretion system protein gspg | DCX48_06425 | P31586 | - | 1270888 - 1271328 | 16342.6 |
| type ii secretion system protein gspf | DCX48_06430 | P31705 | - | 1271396 - 1272622 | 45179.8 |
| type ii secretion system protein gspe | DCX48_06435 | P31703 | - | 1272624 - 1274120 | 55394.2 |
| type ii secretion system protein gspd | DCX48_06440 | P31701 | - | 1274117 - 1276171 | 74415.8 |
| type ii secretion system protein gspc | DCX48_06445 | P31699 | - | 1276158 - 1277021 | 31186.0 |
| glycoside hydrolase family 28 protein | DCX48_06450 | P15922 | - | 1277072 - 1279051 | 71784.0 |
| pectate lyase | DCX48_06455 | P39116 | - | 1279207 - 1280775 | 56976.1 |
| general secretion pathway protein | DCX48_06460 | Q01563 | + | 1281494 - 1282069 | 20538.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.